Subject: ITP: r-cran-brglm2 -- GNU R bias reduction in generalized linear models Package: wnpp Owner: Andreas Tille <tille@debian.org> Severity: wishlist * Package name : r-cran-brglm2 Version : 0.8.2 Upstream Author : Ioannis Kosmidis, * URL : https://cran.r-project.org/package=brglm2 * License : GPL-3 Programming Lang: GNU R Description : GNU R bias reduction in generalized linear models Estimation and inference from generalized linear models based on various methods for bias reduction and maximum penalized likelihood with powers of the Jeffreys prior as penalty. The 'brglmFit' fitting method can achieve reduction of estimation bias by solving either the mean bias- reducing adjusted score equations in Firth (1993) <doi:10.1093/biomet/80.1.27> and Kosmidis and Firth (2009) <doi:10.1093/biomet/asp055>, or the median bias-reduction adjusted score equations in Kenne et al. (2017) <doi:10.1093/biomet/asx046>, or through the direct subtraction of an estimate of the bias of the maximum likelihood estimator from the maximum likelihood estimates as in Cordeiro and McCullagh (1991) <https://www.jstor.org/stable/2345592>. See Kosmidis et al (2020) <doi:10.1007/s11222-019-09860-6> for more details. Estimation in all cases takes place via a quasi Fisher scoring algorithm, and S3 methods for the construction of of confidence intervals for the reduced-bias estimates are provided. In the special case of generalized linear models for binomial and multinomial responses (both ordinal and nominal), the adjusted score approaches to mean and media bias reduction have been found to return estimates with improved frequentist properties, that are also always finite, even in cases where the maximum likelihood estimates are infinite (e.g. complete and quasi- complete separation; see Kosmidis and Firth, 2020 <doi:10.1093/biomet/asaa052>, for a proof for mean bias reduction in logistic regression). Remark: This package is maintained by Debian R Packages Maintainers at https://salsa.debian.org/r-pkg-team/r-cran-brglm2
We believe that the bug you reported is fixed in the latest version of r-cran-brglm2, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1013987@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <tille@debian.org> (supplier of updated r-cran-brglm2 package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmaster@ftp-master.debian.org) Format: 1.8 Date: Tue, 28 Jun 2022 15:56:26 +0200 Source: r-cran-brglm2 Binary: r-cran-brglm2 r-cran-brglm2-dbgsym Architecture: source amd64 Version: 0.8.2+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net> Changed-By: Andreas Tille <tille@debian.org> Description: r-cran-brglm2 - GNU R bias reduction in generalized linear models Closes: 1013987 Changes: r-cran-brglm2 (0.8.2+dfsg-1) unstable; urgency=medium . * Initial release (closes: #1013987) Checksums-Sha1: e594b86f6a507685bdb18171000c393bd050ac9d 2153 r-cran-brglm2_0.8.2+dfsg-1.dsc a493624a286c7928de7221fb17c60252b68ffef6 121736 r-cran-brglm2_0.8.2+dfsg.orig.tar.xz 4b5b3d6085622094ddc7a9f8c0dba4bc36401086 2728 r-cran-brglm2_0.8.2+dfsg-1.debian.tar.xz 473733522970b4570d64b4e5d006dd313e309301 4468 r-cran-brglm2-dbgsym_0.8.2+dfsg-1_amd64.deb 696406a0f27c1434ba15ddf24c88df88e4ef62e7 10956 r-cran-brglm2_0.8.2+dfsg-1_amd64.buildinfo d7de03228e9e7ea8c1feb89f3bb230efb32f2215 300720 r-cran-brglm2_0.8.2+dfsg-1_amd64.deb Checksums-Sha256: 51de64c22a8f738147729938da4aa458a1edcee6f3a7773c05aa3dea64135fea 2153 r-cran-brglm2_0.8.2+dfsg-1.dsc d39c5e5d939b41263f8ff75e9aefc7ececbbb3a651f931fe254a338128ea7856 121736 r-cran-brglm2_0.8.2+dfsg.orig.tar.xz 3b67f30da438e577cc37c4ce9d7bebbe3536faa229ecbad5b825ab08b978ae21 2728 r-cran-brglm2_0.8.2+dfsg-1.debian.tar.xz c6265992c1f72ee0dc8fdc9d3c4e73f1d887b0dc4f913e47ab21ff80a6a29cf7 4468 r-cran-brglm2-dbgsym_0.8.2+dfsg-1_amd64.deb 401c28b34011295596da1955afb98deb3e6d0e284c4b68026a2e922f8035bb3a 10956 r-cran-brglm2_0.8.2+dfsg-1_amd64.buildinfo f683c67bd664078d9e1e302196b132245e3cfc466114897b865e31c84647d032 300720 r-cran-brglm2_0.8.2+dfsg-1_amd64.deb Files: 3e894102e30b0dd63dd611c5259c7f78 2153 gnu-r optional r-cran-brglm2_0.8.2+dfsg-1.dsc f3131076e9abc3351f0eb57139e94eb9 121736 gnu-r optional r-cran-brglm2_0.8.2+dfsg.orig.tar.xz 2a6c1c969e718e03879e4b358f42e5a1 2728 gnu-r optional r-cran-brglm2_0.8.2+dfsg-1.debian.tar.xz 66a89b5a1c170a645924bfa4df2af7a0 4468 debug optional r-cran-brglm2-dbgsym_0.8.2+dfsg-1_amd64.deb b476786f7e35a919618814fc25086bad 10956 gnu-r optional r-cran-brglm2_0.8.2+dfsg-1_amd64.buildinfo 3f5c1fb91b96641a03d7905bd8c0cd9a 300720 gnu-r optional r-cran-brglm2_0.8.2+dfsg-1_amd64.deb -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmK7CdsRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtElRw//Q80MMilVIpaW34ZiHzCUaT7jC633a0FJ kKTaW4pgltNR9HF6P8e6Xrx6ZW88bvW1e3udsmUYpRnvC0mhjQmEi/MU4F+Z7gHo FdfwAN7a/eDZ/WeEb09vXj95bIiipN9gIoeNsTLUx4XozM3Fakxk/+QEPOOzhi+i jH29TB5QjY0UjyQJ9btyWUlM8NAVeAibNj42VOM/wPosdDfgLXUCtIIU8L45Qn1a UYqsmla6K710zERKjNEeFXSgg9qWiDdLAdhLStdfk36lDIDlF8yUyfZh67YiZhwa 8bdzGU+xS+GYQxLZqmb48K0FHH9NMxlKAAzstM/6Lt7J8cTSxQe0wGA/+3qawa97 HysxfFqAx5qCNEdz/Lau+a8sHzW2MNHSoHsVJvcI7+RaQb/ZBrgYrymHaCe7IqHp 5PJ3W92HAps6Q+w9QOPAV4PTMQyc1wJKVG9JbSgV5kxcQ5oNm+7hDvKj72wEgLCs jBFVHxecmYEDaNA8R+KFGV5pkRbDay5oG+DCaSZtW6EME0tUopxYQpa6exw5cus9 WIYkGwreu40wYkEOXMxdEala6mk9SUP80eGzlpRe9UDC5y4wZBEAGlEql7BUesk7 3BR4WoGc1O0mHBaFBDwcbBBEYL8Y6UYksFRNwLAGEd3x0ABgltwyx+SvIi0jLUz5 Da+uLJRXL4I= =u7AQ -----END PGP SIGNATURE-----