Hi, This package fails to build a source package after a successful build (dpkg-buildpackage ; dpkg-buildpackage -S). This is probably a clear violation of Debian Policy section 4.9 (clean target), but this is filed as severity:minor for now, because a discussion on debian-devel showed that we might want to revisit the requirement of a working 'clean' target. More information about this class of issues, included common problems and solutions, is available at https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild Relevant part of the build log: The full build log is available from: http://qa-logs.debian.net/2023/08/13/igv_2.16.1+dfsg-1_unstable.log If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
The fix has been committed to the Salsa repo. Cheers,
We believe that the bug you reported is fixed in the latest version of igv, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1048443@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Pierre Gruet <pgt@debian.org> (supplier of updated igv package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmaster@ftp-master.debian.org) Format: 1.8 Date: Sun, 08 Oct 2023 13:57:54 +0200 Source: igv Architecture: source Version: 2.16.2+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Changed-By: Pierre Gruet <pgt@debian.org> Closes: 1048443 Changes: igv (2.16.2+dfsg-1) unstable; urgency=medium . * New upstream version 2.16.2+dfsg * Fixing the clean target (Closes: #1048443) Checksums-Sha1: d170a4860e3fb81c78df1f779979c0d6aa8a4dc7 2544 igv_2.16.2+dfsg-1.dsc 16bd91dab9b32246231eae11bd2ca0fed32acc85 37868264 igv_2.16.2+dfsg.orig.tar.xz 8a39f58686a597151f7cc7373e6015705a43262f 30800 igv_2.16.2+dfsg-1.debian.tar.xz 4b158f4fec77a5d8f3860244dba22b0ad20dc267 20056 igv_2.16.2+dfsg-1_amd64.buildinfo Checksums-Sha256: 9955807155ce12ccb87cd31d887abf3f75b3978881a33f867d0ad3a5b9815940 2544 igv_2.16.2+dfsg-1.dsc 923cd7330874891ffdd5eb8ae4e1ce4367eb16f07038bf6be3dbbdb45daec135 37868264 igv_2.16.2+dfsg.orig.tar.xz 3498c56ec4f12aaaaeface45f37e5a36546851fa250896ae97faf109cc780d63 30800 igv_2.16.2+dfsg-1.debian.tar.xz 95ef3bd4f89bd0d3c6ceefdafbcd01cbd7e3d525bc2cb21aed860dad67de0b6d 20056 igv_2.16.2+dfsg-1_amd64.buildinfo Files: 1c20ceae031503ed7fd21304b47f871d 2544 science optional igv_2.16.2+dfsg-1.dsc 13c2bfc8cfc66c6c1f04823c8ecbab8c 37868264 science optional igv_2.16.2+dfsg.orig.tar.xz ab90f79b83233d518ccc0732f05c9697 30800 science optional igv_2.16.2+dfsg-1.debian.tar.xz c67e6fa6055b09dfdbd921e7730142a3 20056 science optional igv_2.16.2+dfsg-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEM8soQxPpC9J9y0UjYAMWptwndHYFAmUiozQACgkQYAMWptwn dHZ+KQ/+O6Jang2Zh27hSo/OQe4YaXUv5J/Hfxe9ervtlN1O60Xw6KGsEgoJbZV/ fDxTcZDG/2yEt3tmBGtNsq/8oqKxzDPc9F2IE9g7o5skAmpwZqguBQsp0jHJ2UNx TiQFSh04MkYsXx7Efpy4msnNSvQ+XDnAheqnYGyXSH1DKXy+FS4KPr5ML4hCXezE Wnschl6kwfzG28gDLBJvWKFKohiOBeZXGyPsLEjoCjzpXOg4YH0eAW1bwwNlggie ixEU72ZJFRAYhnq04bZqhQJOLhpzPW01pqCK+r/phZ1BoQjfsTfnALxIVjHhx0f/ PGb+eYRLgFYtK2QLw0TYGMEdT1aelToJxD8rRHSny4bf3xnIuJ499ujKgJ9gbWv5 /q8JBlIG8VFwFLegodKn5VNUdku0Ws08+ho2nNxddtclysgdiAyVb8jZqq6ImJn+ fDvL/MNLMyoIGpR1dJ2stqikk82LSanMLRKiUODtRdcRUEJqEpFnSRQ5VCOMbyW1 Ioc2JMo644Lue6PLj6BYIDAChuyzqOPGGqCFmzqyUexrFVFvGESbp0G9nh4YQ7f1 UtQM5udobk4smE2btVF9T9HJXIFFLmiYF8uH5ssaQfq1rPM+B10LR4BTA827mt38 G4BHeAANPZLX7kfCqfOQuaJUCEl1tMdNpzxn0cysKGnTcjbdCIE= =Tka5 -----END PGP SIGNATURE-----
We believe that the bug you reported is fixed in the latest version of
igv, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1048443@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Pierre Gruet <pgt@debian.org> (supplier of updated igv package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
Format: 1.8
Date: Fri, 06 Feb 2026 23:02:13 +0100
Source: igv
Architecture: source
Version: 2.18.5+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Pierre Gruet <pgt@debian.org>
Closes: 1048443
Changes:
igv (2.18.5+dfsg-2) unstable; urgency=medium
.
* Updating override of dh_clean for leftover files (Closes: #1048443)
* Raising Standards version to 4.7.3:
- Removing Priority: optional, which is default
- Removing R-R-R: no, which is now default
* Rewriting d/watch with version 5
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reopen 1048443 thanks build, this is what happens now: Package: igv Version: 2.18.5+dfsg-2 [...] dpkg-source: info: local changes detected, the modified files are: igv-2.18.5+dfsg/test/data/prefs/testUserPrefs2.properties I'm going to make a team upload to fix this one, because I see there is room for simplifying the whole thing. [ For example, instead of "if file exists then rm file" we can just do "rm -f file". But even that is more complex than required when we can use debian/clean instead ]. Thanks.
We believe that the bug you reported is fixed in the latest version of igv, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1048443@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Santiago Vila <sanvila@debian.org> (supplier of updated igv package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmaster@ftp-master.debian.org) Format: 1.8 Date: Sat, 07 Feb 2026 13:30:00 +0100 Source: igv Architecture: source Version: 2.18.5+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Changed-By: Santiago Vila <sanvila@debian.org> Closes: 1048443 Changes: igv (2.18.5+dfsg-3) unstable; urgency=medium . * Team upload. * Fix clean target. Closes: #1048443. * Simplify and fine-tune salsa-ci.yml. Checksums-Sha1: eff7fc72de71dfa8cae1ad6311eadded26b23746 2218 igv_2.18.5+dfsg-3.dsc 3355b70bcbb02da12f382ed074307f88b1d324a1 33412 igv_2.18.5+dfsg-3.debian.tar.xz 387d44709e5432949c67003443dfab39140d2a93 15989 igv_2.18.5+dfsg-3_source.buildinfo Checksums-Sha256: 32768d928eb1e2b1e8f466cbe9d98dc9b26177e73007fc8050f5570240ffa3cf 2218 igv_2.18.5+dfsg-3.dsc f36d2502d94ca06de03e9ab5a26825a0b171e8c02f4cd0cdc75a894dfb020f29 33412 igv_2.18.5+dfsg-3.debian.tar.xz ff4ed9c2abb4f24b0c37ad4895713394e1822d0c18343ff33136b4e3f21feb69 15989 igv_2.18.5+dfsg-3_source.buildinfo Files: fa2a02aef5312b06ae8b348def0a8cc2 2218 science optional igv_2.18.5+dfsg-3.dsc 57f508d851a6fdde01041dd9b913d1a8 33412 science optional igv_2.18.5+dfsg-3.debian.tar.xz 7e65c029e70aa73d4ce89f4488a0705a 15989 science optional igv_2.18.5+dfsg-3_source.buildinfo -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmmHMfIACgkQQc5/C58b izKmHwf8Cz1Av94S7QdC/cZ5/6jeJ0lsEFzzTkQy2398TZvPKogMsjZzRy7wIaPR mpXvut7/eid/Sl0nD+zhSMwoXQh3hl8Y280XYBQ05V1v8KWcIMfc81jUsrKv1gWs ouRB3qZmKngJN1Ga0/0qCJK4Jh80PXisRaZ0xkUk4IR67CFhPHuHZzsihGiSTKyd 5Uxsb2Zo2/C6WSm0Aa3xuxObpJDrgXOe5KxaOA0h4RpMPZQ11vy6HoBPOqs3DbgR ix1UIvIBPSLxDVWpRZkKlz9B+rJvWU9gM+AzOB14Vtc+0U86flEJjJO0KrwFAmVm 8rfYLhV1dhxtRUn9vCAEqXayU2Q2rQ== =+R7g -----END PGP SIGNATURE-----
(I've had to disable non-working jobs, but I think it's better to have a green pipeline and try not to regress from that than not having a pipeline at all). Thanks.
reopen 1048443 thanks Looks like I refactored debian/rules and debian/clean but forgot to fix the actual bug... Package: igv Version: 2.18.5+dfsg-3 [...] dpkg-source: info: local changes detected, the modified files are: igv-2.18.5+dfsg/test/data/prefs/testUserPrefs2.properties The above error comes from my autobuilders. At the same time, the issue seemed fixed when using this simple script: #!/bin/sh sbuild --arch-all --arch-any --chroot-mode=unshare -d sid-unshare -v --no-run-lintian \ --finished-build-commands="cd %SBUILD_PKGBUILD_DIR && dpkg-buildpackage --sanitize-env -us -uc -S" $1 So there is something I'm missing but don't know what it could be. Sorry for the fuss, I'm going to investigate more. Thanks.
However, the produced .deb is the same regardless of the file being present or being removed by debian/clean. So the fix is to remove the file unconditionally (done in -4). Thanks.
We believe that the bug you reported is fixed in the latest version of igv, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1048443@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Santiago Vila <sanvila@debian.org> (supplier of updated igv package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmaster@ftp-master.debian.org) Format: 1.8 Date: Sat, 07 Feb 2026 16:50:00 +0100 Source: igv Architecture: source Version: 2.18.5+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Changed-By: Santiago Vila <sanvila@debian.org> Closes: 1048443 Changes: igv (2.18.5+dfsg-4) unstable; urgency=medium . * Team upload. * Really fix clean target. Closes: #1048443. Checksums-Sha1: ac5f3d705720e557c22743069ffd7156e3961e49 2218 igv_2.18.5+dfsg-4.dsc 05696e7249e5f20b75c5402e26c39c99d4a72bc4 33440 igv_2.18.5+dfsg-4.debian.tar.xz 23b03b4d448be487f618605df1dc3b102124a407 15989 igv_2.18.5+dfsg-4_source.buildinfo Checksums-Sha256: 0bb848b85dd986547ed7bc6577cc2f95df8abba9225f160c024be07377081775 2218 igv_2.18.5+dfsg-4.dsc 028f8f3705cc46a43803e76bd7de5081fa9b60eb1115ce7009d53553161b2151 33440 igv_2.18.5+dfsg-4.debian.tar.xz abd082b3964415a13ff779448bbf62a7d1582862de0f21c6ea957f60088f0eaf 15989 igv_2.18.5+dfsg-4_source.buildinfo Files: 071db104eac141d2a234bd43703dc924 2218 science optional igv_2.18.5+dfsg-4.dsc 9c3a105f35642528da618bfb37bafa42 33440 science optional igv_2.18.5+dfsg-4.debian.tar.xz 4ddbfb30a318036ddd3714087143b58b 15989 science optional igv_2.18.5+dfsg-4_source.buildinfo -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmmHX8kACgkQQc5/C58b izLWTAf/eg6WYVc1Sw/Z13070647pQnBh7220qhQBZoP/lpQ8gjghDKc6It+yOQv UYawDuBVG+ZiUveN3v+RCznRI8hRwTrA2pURAty1GdS4L2iJAoNb44w+w2AFpmrh ac9uxbfTKaOXhB7WktxWbY6ZVSJFiu5fXNDd5ae2Atxo6g3FskXxEhJVcxYQHa0M 7uXOgPDqEbzmxt2vWCny+MqH6X5EqHApwEXq36Vkn9lkWsJmYMp2WMzjIXNUvSrF BnB70yjqdsrLQ3q1obXqL5GsbIm1TOA1YPwr9EIWQDkkRp0uWldichu3Ffj23Jl9 mDBlchTtPO1EIbL3CBrkmugOFcYD7g== =7OOV -----END PGP SIGNATURE-----