#1059277 openbabel: CVE-2022-37331 CVE-2022-41793 CVE-2022-42885 CVE-2022-43467 CVE-2022-43607 CVE-2022-44451 CVE-2022-46280 CVE-2022-46289 CVE-2022-46290 CVE-2022-46291 CVE-2022-46292 CVE-2022-46293 CVE-2022-46294 CVE-2022-46295

Package:
src:openbabel
Source:
src:openbabel
Submitter:
Moritz Mühlenhoff
Date:
2026-06-05 08:13:01 UTC
Severity:
normal
Tags:
#1059277#5
Date:
2023-12-22 12:06:17 UTC
From:
To:
Hi,

The following vulnerabilities were published for openbabel.

It's unclear if these were ever properly reported upstream/fixed,
could you please sync up with the upstream developers?

CVE-2022-37331[0]:
| An out-of-bounds write vulnerability exists in the Gaussian format
| orientation functionality of Open Babel 3.1.1 and master commit
| 530dbfa3. A specially crafted malformed file can lead to arbitrary
| code execution. An attacker can provide a malicious file to trigger
| this vulnerability.

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1672

CVE-2022-41793[1]:
| An out-of-bounds write vulnerability exists in the CSR format title
| functionality of Open Babel 3.1.1 and master commit 530dbfa3. A
| specially crafted malformed file can lead to arbitrary code
| execution. An attacker can provide a malicious file to trigger this
| vulnerability.

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1667

CVE-2022-42885[2]:
| A use of uninitialized pointer vulnerability exists in the GRO
| format res functionality of Open Babel 3.1.1 and master commit
| 530dbfa3. A specially crafted malformed file can lead to arbitrary
| code execution. An attacker can provide a malicious file to trigger
| this vulnerability.

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1668

CVE-2022-43467[3]:
| An out-of-bounds write vulnerability exists in the PQS format
| coord_file functionality of Open Babel 3.1.1 and master commit
| 530dbfa3. A specially crafted malformed file can lead to arbitrary
| code execution. An attacker can provide a malicious file to trigger
| this vulnerability.

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1671

CVE-2022-43607[4]:
| An out-of-bounds write vulnerability exists in the MOL2 format
| attribute and value functionality of Open Babel 3.1.1 and master
| commit 530dbfa3. A specially crafted malformed file can lead to
| arbitrary code execution. An attacker can provide a malicious file
| to trigger this vulnerability.

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1664

CVE-2022-44451[5]:
| A use of uninitialized pointer vulnerability exists in the MSI
| format atom functionality of Open Babel 3.1.1 and master commit
| 530dbfa3. A specially crafted malformed file can lead to arbitrary
| code execution. An attacker can provide a malicious file to trigger
| this vulnerability.

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1669

CVE-2022-46280[6]:
| A use of uninitialized pointer vulnerability exists in the PQS
| format pFormat functionality of Open Babel 3.1.1 and master commit
| 530dbfa3. A specially crafted malformed file can lead to arbitrary
| code execution. An attacker can provide a malicious file to trigger
| this vulnerability.

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1670

CVE-2022-46289[7]:
| Multiple out-of-bounds write vulnerabilities exist in the ORCA
| format nAtoms functionality of Open Babel 3.1.1 and master commit
| 530dbfa3. A specially-crafted malformed file can lead to arbitrary
| code execution. An attacker can provide a malicious file to trigger
| this vulnerability.nAtoms calculation wrap-around, leading to a
| small buffer allocation

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1665

CVE-2022-46290[8]:
| Multiple out-of-bounds write vulnerabilities exist in the ORCA
| format nAtoms functionality of Open Babel 3.1.1 and master commit
| 530dbfa3. A specially-crafted malformed file can lead to arbitrary
| code execution. An attacker can provide a malicious file to trigger
| this vulnerability.The loop that stores the coordinates does not
| check its index against nAtoms

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1665

CVE-2022-46291[9]:
| Multiple out-of-bounds write vulnerabilities exist in the
| translationVectors parsing functionality in multiple supported
| formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-
| crafted malformed file can lead to arbitrary code execution. An
| attacker can provide a malicious file to trigger this
| vulnerability.This vulnerability affects the MSI file format

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1666

CVE-2022-46292[10]:
| Multiple out-of-bounds write vulnerabilities exist in the
| translationVectors parsing functionality in multiple supported
| formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-
| crafted malformed file can lead to arbitrary code execution. An
| attacker can provide a malicious file to trigger this
| vulnerability.This vulnerability affects the MOPAC file format,
| inside the Unit Cell Translation section

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1666

CVE-2022-46293[11]:
| Multiple out-of-bounds write vulnerabilities exist in the
| translationVectors parsing functionality in multiple supported
| formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-
| crafted malformed file can lead to arbitrary code execution. An
| attacker can provide a malicious file to trigger this
| vulnerability.This vulnerability affects the MOPAC file format,
| inside the Final Point and Derivatives section

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1666

CVE-2022-46294[12]:
| Multiple out-of-bounds write vulnerabilities exist in the
| translationVectors parsing functionality in multiple supported
| formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-
| crafted malformed file can lead to arbitrary code execution. An
| attacker can provide a malicious file to trigger this
| vulnerability.This vulnerability affects the MOPAC Cartesian file
| format

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1666

CVE-2022-46295[13]:
| Multiple out-of-bounds write vulnerabilities exist in the
| translationVectors parsing functionality in multiple supported
| formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-
| crafted malformed file can lead to arbitrary code execution. An
| attacker can provide a malicious file to trigger this
| vulnerability.This vulnerability affects the Gaussian file format

https://talosintelligence.com/vulnerability_reports/TALOS-2022-1666

If you fix the vulnerabilities please also make sure to include the
CVE (Common Vulnerabilities & Exposures) ids in your changelog entry.

For further information see:

[0] https://security-tracker.debian.org/tracker/CVE-2022-37331
https://www.cve.org/CVERecord?id=CVE-2022-37331
[1] https://security-tracker.debian.org/tracker/CVE-2022-41793
https://www.cve.org/CVERecord?id=CVE-2022-41793
[2] https://security-tracker.debian.org/tracker/CVE-2022-42885
https://www.cve.org/CVERecord?id=CVE-2022-42885
[3] https://security-tracker.debian.org/tracker/CVE-2022-43467
https://www.cve.org/CVERecord?id=CVE-2022-43467
[4] https://security-tracker.debian.org/tracker/CVE-2022-43607
https://www.cve.org/CVERecord?id=CVE-2022-43607
[5] https://security-tracker.debian.org/tracker/CVE-2022-44451
https://www.cve.org/CVERecord?id=CVE-2022-44451
[6] https://security-tracker.debian.org/tracker/CVE-2022-46280
https://www.cve.org/CVERecord?id=CVE-2022-46280
[7] https://security-tracker.debian.org/tracker/CVE-2022-46289
https://www.cve.org/CVERecord?id=CVE-2022-46289
[8] https://security-tracker.debian.org/tracker/CVE-2022-46290
https://www.cve.org/CVERecord?id=CVE-2022-46290
[9] https://security-tracker.debian.org/tracker/CVE-2022-46291
https://www.cve.org/CVERecord?id=CVE-2022-46291
[10] https://security-tracker.debian.org/tracker/CVE-2022-46292
https://www.cve.org/CVERecord?id=CVE-2022-46292
[11] https://security-tracker.debian.org/tracker/CVE-2022-46293
https://www.cve.org/CVERecord?id=CVE-2022-46293
[12] https://security-tracker.debian.org/tracker/CVE-2022-46294
https://www.cve.org/CVERecord?id=CVE-2022-46294
[13] https://security-tracker.debian.org/tracker/CVE-2022-46295
https://www.cve.org/CVERecord?id=CVE-2022-46295

Please adjust the affected versions in the BTS as needed.

#1059277#10
Date:
2023-12-22 12:19:29 UTC
From:
To:
forwarded 1059277 https://github.com/openbabel/openbabel/issues/2650
thanks

Hi,

Thanks, I checked, and it looks like Cisco disclosed it to the Openbabel
maintainers with some lead time, and they will fix them for the next
version.


Michael

#1059277#23
Date:
2026-06-05 07:31:37 UTC
From:
To:
The Debian NEW review of openbabel 3.2.0+dfsg-1~exp has been completed.

Decision: ACCEPTED
Reviewer: Andrew McMillan

Review comment:

Hi,

Some notes from my review which it would be good if you could fix on your
next upload...

There seem to be three authors missing from the credits list in debian/copyright - see full notes for list.

The license listed as 'Artistic' is a variant of the original Artistic license known as the "Frontier Artistic License".  The differences are subtle and it doesn't affect it's DFSG status, but renaming it would be clearer - ideally the full license text for each license should be included in the debian/copyright too.

The license listed as 'Perl' appears to be an upgradable grant which should mean that it is licensed under the Artistic-2.0 license, since that is the terms under which "Perl" is currently licensed.

Thanks!


Full text of Frontier Artistic License below.
=============================================

THE FRONTIER ARTISTIC LICENSE Version 1.0
Copyright © (c) 1999 by Samuel Reynolds.
Derived from the "Artistic License" at "OpenSource.org".
Submitted to OpenSource.org for Open Source Initiative certification.

PREAMBLE

The intent of this document is to state the conditions under which a
Package may be copied, such that the Copyright Holder maintains some
semblance of artistic control over the development of the package,
while giving the users of the package the right to use and distribute
the Package in a more-or-less customary fashion, plus the right to
make reasonable modifications.

DEFINITIONS

o   "Package" refers to the script, suite, file, or collection of scripts,
    suites, and/or files distributed by the Copyright Holder, and to
    derivatives of that Package created through textual modification.

o   "Standard Version" refers to such a Package if it has not been
    modified, or has been modified in accordance with the wishes of the
    Copyright Holder.

o   "Copyright Holder" is whoever is named in the copyright statement or
    statements for the package.

o   "You" is you, if you're thinking about copying or distributing this
    Package.

o   "Reasonable copying fee" is whatever you can justify on the basis of
    media cost, duplication charges, time of people involved, and so on.
    (You will not be required to justify it to the Copyright Holder, but
    only to the computing community at large as a market that must bear the
    fee.)

o   "Freely Available" means that no fee is charged for the item itself,
    though there may be fees involved in handling the item.  It also means
    that recipients of the item may redistribute it under the same
    conditions they received it.

TERMS

1.  You may make and give away verbatim copies of the source form of the
    Standard Version of this Package without restriction, provided that you
    duplicate all of the original copyright notices and associated disclaimers.

2.  You may apply bug fixes, portability fixes, and other modifications
    derived from the Public Domain or from the Copyright Holder.  A Package
    modified in such a way shall still be considered the Standard Version.

3.  You may otherwise modify your copy of this Package in any way, provided
    that you insert a prominent notice in each changed script, suite, or file
    stating how and when you changed that script, suite, or file, and provided
    that you do at least ONE of the following:

    a) Use the modified Package only within your corporation or
    organization, or retain the modified Package solely for personal use.

    b) Place your modifications in the Public Domain or otherwise make them
    Freely Available, such as by posting said modifications to Usenet or an
    equivalent medium, or placing the modifications on a major archive site
    such as ftp.uu.net, or by allowing the Copyright Holder to include your
    modifications in the Standard Version of the Package.

    c) Rename any non-standard executables so the names do not conflict
    with standard executables, which must also be provided, and provide a
    separate manual page (or equivalent) for each non-standard executable
    that clearly documents how it differs from the Standard Version.

    d) Make other distribution arrangements with the Copyright Holder.

4.  You may distribute the programs of this Package in object code or
    executable form, provided that you do at least ONE of the following:

    a) Distribute a Standard Version of the executables and library files,
    together with instructions (in the manual page or equivalent) on where
    to get the Standard Version.

    b) Accompany the distribution with the machine-readable source of the
    Package with your modifications.

    c) Accompany any non-standard executables with their corresponding
    Standard Version executables, give the non-standard executables
    non-standard names, and clearly document the differences in manual
    pages (or equivalent), together with instructions on where to get the
    Standard Version.

    d) Make other distribution arrangements with the Copyright Holder.

5.  You may charge a reasonable copying fee for any distribution of this
    Package.  You may charge any fee you choose for support of this Package.
    You may not charge a fee for this Package itself.  However, you may
    distribute this Package in aggregate with other (possibly commercial)
    programs as part of a larger (possibly commercial) software distribution
    provided that you do not advertise this Package as a product of your own.

6.  The scripts and library files supplied as input to or produced as
    output from the programs of this Package do not automatically fall under
    the copyright of this Package, but belong to whomever generated them, and
    may be sold commercially, and may be aggregated with this Package.

7.  Scripts, suites, or programs supplied by you that depend on or
    otherwise make use of this Package shall not be considered part of this
    Package.

8.  The name of the Copyright Holder may not be used to endorse or promote
    products derived from this software without specific prior written
    permission.

9.  THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
    WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES OF
    MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE.

Full review details: https://dfsg-new-queue.debian.org/reviews/openbabel

#1059277#28
Date:
2026-06-05 08:10:23 UTC
From:
To:
We believe that the bug you reported is fixed in the latest version of
openbabel, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1059277@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andrius Merkys <merkys@debian.org> (supplier of updated openbabel package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
Format: 1.8
Date: Wed, 27 May 2026 03:58:19 -0400
Source: openbabel
Binary: libchemistry-openbabel-perl libchemistry-openbabel-perl-dbgsym libopenbabel-dev libopenbabel-doc libopenbabel8 libopenbabel8-dbgsym openbabel openbabel-dbgsym openbabel-gui openbabel-gui-dbgsym python3-openbabel python3-openbabel-dbgsym
Architecture: source amd64 all
Version: 3.2.0+dfsg-1~exp
Distribution: experimental
Urgency: medium
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Changed-By: Andrius Merkys <merkys@debian.org>
Description:
 libchemistry-openbabel-perl - Chemical toolbox library (perl bindings)
 libopenbabel-dev - Chemical toolbox library (development files)
 libopenbabel-doc - Chemical toolbox library (documentation)
 libopenbabel8 - Chemical toolbox library
 openbabel  - Chemical toolbox utilities (cli)
 openbabel-gui - Chemical toolbox utilities (graphical user interface)
 python3-openbabel - Chemical toolbox library (Python bindings)
Closes: 1059277 1116462 1129566
Changes:
 openbabel (3.2.0+dfsg-1~exp) experimental; urgency=medium
 .
   * New upstream release (Closes: #1059277, #1116462, #1129566)
     [CVE-2022-37331, CVE-2022-41793, CVE-2022-42885, CVE-2022-43467,
      CVE-2022-43607, CVE-2022-44451, CVE-2022-46280, CVE-2022-46289,
      CVE-2022-46290, CVE-2022-46291, CVE-2022-46292, CVE-2022-46293,
      CVE-2022-46294, CVE-2022-46295, CVE-2025-10994, CVE-2025-10995,
      CVE-2025-10996, CVE-2025-10997, CVE-2025-10998, CVE-2025-10999,
      CVE-2025-11000, CVE-2026-2704, CVE-2026-2705, CVE-2026-3408]
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