#1102548 r-cran-dendextend: autopkgtest failure

#1102548#5
Date:
2025-04-10 10:10:00 UTC
From:
To:
https://tracker.debian.org/pkg/r-cran-dendextend

Issues preventing migration:
∙ ∙ autopkgtest for r-cran-dendextend/1.19.0+dfsg-1: amd64: Regression or new test ♻, arm64: Regression or new test ♻, armel: Regression or new test ♻, armhf: Regression or new test ♻, i386: Regression or new test ♻, ppc64el: Regression or new test ♻, riscv64: Regression or new test ♻, s390x: Regression or new test ♻


...
135s [ FAIL 1 | WARN 390 | SKIP 0 | PASS 872 ]
135s
135s == Failed tests ================================================================
135s -- Failure ('test-untangle.R:380:4'): untangle_DendSer works -------------------
135s `best_entanglement` not identical to 0.
135s 1/1 mismatches
135s [1] 0.0143 - 0 == 0.0143
135s
135s [ FAIL 1 | WARN 390 | SKIP 0 | PASS 872 ]
135s Error: Test failures
135s Execution halted
136s autopkgtest [21:27:26]: test run-unit-test: -----------------------]
136s autopkgtest [21:27:26]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
136s run-unit-test        FAIL non-zero exit status 1
...

#1102548#10
Date:
2025-04-10 10:52:46 UTC
From:
To:
Le Thu, Apr 10, 2025 at 01:10:00PM +0300, Adrian Bunk a écrit :

Hi Adrian,

thanks for the patches in the other bug reports and thanks for your
involvement in r-* package management,

just to let you know, we are aware of the autopkgtest issues preventing
migration to Testing through the UDD dashboard:

https://udd.debian.org/dmd/?r-pkg-team%40alioth-lists.debian.net#todo

On my side I consult it every working day.  So if the bugs that you fill
have no intended action on the release mechanisms (for instance
triggering removals from Testing earlier), then please feel free to not
fill them if it is extra work for you.

I think that the top priority now is to fix r-cran-testhat, which has a
very long list of reverse dependencies.  The reason I fixed other issues
this week is that they were low-hanging fruits and I only had time for
that.

Have a nice day,

Charles

#1102548#15
Date:
2025-04-10 11:11:19 UTC
From:
To:
OK.

For everything that is not in testing it's now or not in trixie.

r-cran-testhat can still be fixed next week.

cu
Adrian

#1102548#20
Date:
2025-08-15 16:05:46 UTC
From:
To:
This is because this test implicitly requires DendSer, which isn't in
Debian:
https://github.com/talgalili/dendextend/issues/154

Upstream 1.19.1 skips the test when this is not available.

Of the R team's currently open RC bugs, this is the only one where a new
upstream version is likely to help.  (While the above implies that
r-cran-dextend is not actually broken for users, it's still RC in the
sense of not allowing r-cran-dextend in testing.)

Hence, I propose to update r-cran-dextend (and re-add r-cran-plotly's
test-Depends that I removed because of this, #1104338) soon, not wait
for the general post-release mass-update.

#1102548#27
Date:
2025-08-29 15:44:21 UTC
From:
To:
We believe that the bug you reported is fixed in the latest version of
r-cran-dendextend, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1102548@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Rebecca N. Palmer <rebecca_palmer@zoho.com> (supplier of updated r-cran-dendextend package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
Format: 1.8
Date: Fri, 15 Aug 2025 17:24:08 +0100
Source: r-cran-dendextend
Architecture: source
Version: 1.19.1+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Closes: 1102548
Changes:
 r-cran-dendextend (1.19.1+dfsg-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version. (Closes: #1102548)
   * Standards-Version: 4.7.2 (no changes needed).
Checksums-Sha1:
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 177fabe10c84513c0910c55e289989dfbc14cffb 433728 r-cran-dendextend_1.19.1+dfsg.orig.tar.xz
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 a0b3542b86e6e4ea58cb01db5e34ea695363e0a7 6130 r-cran-dendextend_1.19.1+dfsg-1_source.buildinfo
Checksums-Sha256:
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 1d079317376c99b214ddc84331a01eac95adb1d4beccbf33ea5ba61c9e783c63 3480 r-cran-dendextend_1.19.1+dfsg-1.debian.tar.xz
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Files:
 97b91a492c291055ac507f2ade1cb859 2501 gnu-r optional r-cran-dendextend_1.19.1+dfsg-1.dsc
 a422e7778e9a3e78cc7f8b7125f82165 433728 gnu-r optional r-cran-dendextend_1.19.1+dfsg.orig.tar.xz
 4da5517d5b63500a96d8866d5ccce1b1 3480 gnu-r optional r-cran-dendextend_1.19.1+dfsg-1.debian.tar.xz
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