Hi,

GNU Make now has a --shuffle option that simulates non-deterministic ordering
of target prerequisites. See
https://trofi.github.io/posts/238-new-make-shuffle-mode.html and also previous
work in Debian by Santiago Vila:
https://people.debian.org/~sanvila/make-shuffle/

This package fails to build with make --shuffle=reverse.
This is likely to be caused by a missing dependency in
debian/rules or an upstream Makefile.

More information about this mass bug filing is available at
https://wiki.debian.org/qa.debian.org/FTBFS/Shuffle

Relevant part (hopefully):
The full build log is available from:
http://qa-logs.debian.net/2025/05/05/shuffle/reverse/allelecount_4.3.0-3_unstable_reverse.log

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

Hello,

Bug #1105234 in allelecount reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/med-team/allelecount/-/commit/370af3bbb0576fd2cf7a0a01869068708f383b17
------------------------------------------------------------------------
stabilise-makefiles.patch: new: fix --shuffle.

Closes: #1105234
------------------------------------------------------------------------

(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/1105234

We believe that the bug you reported is fixed in the latest version of
allelecount, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1105234@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Étienne Mollier <emollier@debian.org> (supplier of updated allelecount package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
Format: 1.8
Date: Thu, 05 Mar 2026 22:25:20 +0100
Source: allelecount
Architecture: source
Version: 4.3.0-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Étienne Mollier <emollier@debian.org>
Closes: 1105234
Changes:
 allelecount (4.3.0-4) unstable; urgency=medium
 .
   * stabilise-makefiles.patch: new: fix --shuffle. (Closes: #1105234)
   * hardening.patch: normalize Last-Update time stamp.
   * d/watch: bump to Github uscan template version 5.
   * perl-fixups.patch: new: fix heading, typos and style in manuals.
   * d/control: add myself to uploaders.
   * d/control: drop redundant Priority: optional.
   * d/control: drop redundant Rules-Requires-Root: no.
   * d/control: declare compliance to standards version 4.7.3.
   * d/lintian-overrides: delete: unused override.
Checksums-Sha1:
 d91d6a40ed24af36ca773fd7a83a5b211dffaaf6 2570 allelecount_4.3.0-4.dsc
 0867a1fbd68c7123999717f1a2868d6cf8161ed6 17472 allelecount_4.3.0-4.debian.tar.xz
Checksums-Sha256:
 ea6956c92a51e2e7ac4f746ae388e1b68b1e9b985d9b13ce80052f527672451f 2570 allelecount_4.3.0-4.dsc
 072dc464e963c0e65bfdf5dd3bb53071214fc7a98858549b52af8218b547a6ef 17472 allelecount_4.3.0-4.debian.tar.xz
Files:
 9d2331b60b05b9d09c1a6727e67ba348 2570 science optional allelecount_4.3.0-4.dsc
 9a06fbc370b360713ea37cd76507ad43 17472 science optional allelecount_4.3.0-4.debian.tar.xz
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