Hi,

GNU Make now has a --shuffle option that simulates non-deterministic ordering
of target prerequisites. See
https://trofi.github.io/posts/238-new-make-shuffle-mode.html and also previous
work in Debian by Santiago Vila:
https://people.debian.org/~sanvila/make-shuffle/

This package fails to build with make --shuffle=reverse.
This is likely to be caused by a missing dependency in
debian/rules or an upstream Makefile.

More information about this mass bug filing is available at
https://wiki.debian.org/qa.debian.org/FTBFS/Shuffle

Relevant part (hopefully):
The full build log is available from:
http://qa-logs.debian.net/2025/05/05/shuffle/reverse/raxml_8.2.13+dfsg-2_unstable_reverse.log

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

We believe that the bug you reported is fixed in the latest version of
raxml, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1105678@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Étienne Mollier <emollier@debian.org> (supplier of updated raxml package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
Format: 1.8
Date: Fri, 19 Dec 2025 20:36:27 +0100
Source: raxml
Architecture: source
Version: 8.2.13+dfsg-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Étienne Mollier <emollier@debian.org>
Closes: 1105678
Changes:
 raxml (8.2.13+dfsg-3) unstable; urgency=medium
 .
   * d/control: fix standards version declaration.
   * d/copyright: drop the old FSF mail address.
   * d/watch: convert to v5 Github template.
   * d/control: drop redundant Rules-Requires-Root: no.
   * stabilize-makefiles.patch: new.
     This patche makes the "all" target more robust to unordered
     invocations by dropping the dependency on the "clean" target.
     (Closes: #1105678)
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 97a3eb0469ab1d7e4fcf37b31e1b4323cb306e9a 22476 raxml_8.2.13+dfsg-3.debian.tar.xz
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 7e8adefbf063ad8b6809a3512048e26407dc888d90b17d5e2ccaa1e82e688125 22476 raxml_8.2.13+dfsg-3.debian.tar.xz
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