Hi,

During a test rebuild of HDF5's reverse dependencies against HDF5 2.1.0
currently in experimental, stimfit FTBFS because its check on HDF5
version doesn't expect a majot release number > 1.

The attached patch fixes this issue and works with both HDF5 releases
1.14.6 and 2.1.0.

Best,
_g.


- -- System Information:
Debian Release: 12.0
Architecture: amd64 (x86_64)

Kernel: Linux 6.1.0-44-amd64 (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
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Dear Gilles,

thank you for the report and patch.

I have prepared stimfit 0.16.11-3 with your HDF5 2.x fix.

The source package is uploaded to mentors:

https://mentors.debian.net/package/stimfit/

Would it be possible for you to sponsor this upload?

Best,
Christoph

Hi Christoph,

Could you please push your changes to the package's repo?

Thanks,
_g.

Le 2026-06-10 14:36, Christoph Schmidt-Hieber a écrit :

We believe that the bug you reported is fixed in the latest version of
stimfit, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1139613@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Christoph Schmidt-Hieber <christsc@gmx.de> (supplier of updated stimfit package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
Format: 1.8
Date: Wed, 10 Jun 2026 11:06:16 +0000
Source: stimfit
Binary: python3-stfio python3-stfio-dbgsym stimfit stimfit-dbgsym
Architecture: source amd64
Version: 0.16.11-3
Distribution: unstable
Urgency: medium
Maintainer: Christoph Schmidt-Hieber <christsc@gmx.de>
Changed-By: Christoph Schmidt-Hieber <christsc@gmx.de>
Description:
 python3-stfio - Python module to read common electrophysiology file formats
 stimfit    - Program for viewing and analyzing electrophysiological data
Closes: 1139613
Changes:
 stimfit (0.16.11-3) unstable; urgency=medium
 .
   * Fix FTBFS with HDF5 2.x. Thanks to Gilles Filippini for the patch.
     (Closes: #1139613)
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