#1139615 unifrac-tools: FTBFS against HDF5 2.1.0

Package:
src:unifrac-tools
Source:
src:unifrac-tools
Submitter:
Gilles Filippini
Date:
2026-06-16 20:25:01 UTC
Severity:
normal
Tags:
#1139615#5
Date:
2026-06-10 09:28:23 UTC
From:
To:
Hi,

During a test rebuild of HDF5's reverse dependencies against HDF5 2.1.0
currently in experimental, unifrac-tools FTBFS because its build
toolchain doesn't support this new major release.

The attached patch is a workaround for this issue and supports both
HDF5 1.14.6 in unstable and HDF5 2.1.0 in experimental.

Best,
_g.


- -- System Information:
Debian Release: 12.0
Architecture: amd64 (x86_64)

Kernel: Linux 6.1.0-44-amd64 (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
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#1139615#8
Date:
2026-06-16 20:24:20 UTC
From:
To:
Hello,

Bug #1139615 in unifrac-tools reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/med-team/unifrac-tools/-/commit/cef3a8a1153e268a04785cfc043111a1c2650aa6

(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/1139615