The following command failed with exit code 1
/usr/bin/iva --threads 1 --trimmomatic /usr/share/java/trimmomatic.jar
--pcr_primers hiv_pcr_primers.fa -f reads_1.fq.gz -r reads_2.fq.gz iva.out
The output was:
Error! File "hiv_pcr_primers.fa" not found. Cannot continue
Traceback (most recent call last):
File "/usr/bin/iva", line 184, in <module>
p1.start()
~~~~~~~~^^
File "/usr/lib/python3.14/multiprocessing/process.py", line 121, in start
self._popen = self._Popen(self)
~~~~~~~~~~~^^^^^^
File "/usr/lib/python3.14/multiprocessing/context.py", line 230, in _Popen
return _default_context.get_context().Process._Popen(process_obj)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^
File "/usr/lib/python3.14/multiprocessing/context.py", line 306, in _Popen
return Popen(process_obj)
File "/usr/lib/python3.14/multiprocessing/popen_forkserver.py", line 35, in
__init__
super().__init__(process_obj)
~~~~~~~~~~~~~~~~^^^^^^^^^^^^^
File "/usr/lib/python3.14/multiprocessing/popen_fork.py", line 20, in
__init__
self._launch(process_obj)
~~~~~~~~~~~~^^^^^^^^^^^^^
File "/usr/lib/python3.14/multiprocessing/popen_forkserver.py", line 51, in
_launch
self.sentinel, w = forkserver.connect_to_new_process(self._fds)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^
File "/usr/lib/python3.14/multiprocessing/forkserver.py", line 106, in
connect_to_new_process
connection.answer_challenge(
~~~~~~~~~~~~~~~~~~~~~~~~~~~^
wrapped_client, self._forkserver_authkey)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib/python3.14/multiprocessing/connection.py", line 995, in
answer_challenge
message = connection.recv_bytes(256) # reject large message
File "/usr/lib/python3.14/multiprocessing/connection.py", line 226, in
recv_bytes
buf = self._recv_bytes(maxlength)
File "/usr/lib/python3.14/multiprocessing/connection.py", line 451, in
_recv_bytes
buf = self._recv(4)
File "/usr/lib/python3.14/multiprocessing/connection.py", line 416, in _recv
chunk = read(handle, to_read)
ConnectionResetError: [Errno 104] Connection reset by peer