#1151617 ITP: gbwt -- Substring index for paths in a graph

Package:
wnpp
Source:
wnpp
Submitter:
Andreas Tille
Date:
2026-10-22 08:35:13 UTC
Severity:
normal
#1151617#5
Date:
2026-10-22 08:33:47 UTC
From:
To:
Subject: ITP: gbwt -- Substring index for paths in a graph
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist

* Package name    : gbwt
  Version         : 1.6
  Upstream Author : , 2018, Jouni Siren
* URL             : https://github.com/jltsiren/gbwt
* License         : Expat
  Programming Lang: C
  Description     : Substring index for paths in a graph
 Graph BWT is an independent implementation of the graph extension (gPBWT) of
 the positional Burrows-Wheeler transform (PBWT). Its initial purpose is to
 embed observed haplotypes in a variation graph. Haplotypes are essentially
 sequences of nodes in the variation graph, and GBWT is best seen as the
 multi-string BWT of the node sequences.

Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/gbwt