#919681 ITP: sourmash -- tools for comparing DNA sequences with MinHash sketches

Package:
wnpp
Source:
wnpp
Submitter:
"Michael R. Crusoe"
Date:
2025-01-18 00:03:02 UTC
Severity:
wishlist
#919681#5
Date:
2019-01-18 15:08:16 UTC
From:
To:
* Package name    : sourmash
  Version         : 2.0.0~a11
  Upstream Author : C. Titus Brown <titus@idyll.org>, Luiz C. Irber, Jr <sourmash@luizirber.org>
* URL             : http://sourmash.readthedocs.io/en/latest/
* License         : BSD-3-Clause
  Programming Lang: Python, C++
  Description     : tools for comparing DNA sequences with MinHash sketches

 Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.
 .
 MinHash sketches provide a lightweight way to store “signatures” of large DNA
 or RNA sequence collections, and then compare or search them using a Jaccard
 index. MinHash sketches can be used to identify samples, find similar samples,
 identify data sets with shared sequences, and build phylogenetic trees
 (Ondov et al. 2015).
 .
 sourmash provides a command line script, a Python library, and a CPython
 module for MinHash sketches

Sourmash is team maintained by Debian-Med at https://salsa.debian.org/med-team/sourmash

#919681#12
Date:
2024-09-25 16:17:47 UTC
From:
To:
Hi!

I can help with those. I saw that you start with az, I will start for
bottom. :-D

#919681#23
Date:
2025-01-17 23:59:47 UTC
From:
To:
We believe that the bug you reported is fixed in the latest version of
sourmash, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 919681@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe <crusoe@debian.org> (supplier of updated sourmash package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
Format: 1.8
Date: Sat, 18 Jan 2025 00:03:51 +0100
Source: sourmash
Binary: sourmash sourmash-dbgsym
Architecture: source amd64
Version: 4.8.14-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <crusoe@debian.org>
Description:
 sourmash   - tools for comparing DNA sequences with MinHash sketches
Closes: 919681
Changes:
 sourmash (4.8.14-1) unstable; urgency=medium
 .
   * Initial release. (Closes: #919681)
Checksums-Sha1:
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 52df1ffcec9d2a898cb1b504106a524970e498e4 5116 sourmash_4.8.14-1.debian.tar.xz
 3152fa5164f833c17a87a3320547ecfabe48a02c 6855824 sourmash-dbgsym_4.8.14-1_amd64.deb
 2adebf7edd9c626ce85ba5ee2602b04f8bbc1e08 26148 sourmash_4.8.14-1_amd64.buildinfo
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Checksums-Sha256:
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 bf9dd8505f6a54354f7417094a7bee92d1b0c7a2593f93546fa398382cd9ff1c 686056 sourmash_4.8.14-1_amd64.deb
Files:
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 567948daa899ca63e344108fcc14b4ec 21855407 python optional sourmash_4.8.14.orig.tar.gz
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 a3497ff98bbeb1082292487f6ec9400c 26148 python optional sourmash_4.8.14-1_amd64.buildinfo
 1e0848818a2ea5dd58e399795fffe702 686056 python optional sourmash_4.8.14-1_amd64.deb
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