#963530 ITP: fieldbioinformatics -- pipeline for working with virus sequencing data sequenced with nanopore

Package:
wnpp
Source:
wnpp
Submitter:
Malihe Asemani
Date:
2025-11-29 16:46:42 UTC
Severity:
wishlist
#963530#5
Date:
2020-06-23 08:44:25 UTC
From:
To:
Subject: ITP: fieldbioinformatics -- pipeline for working with virus sequencing data sequenced with nanopore
Package: wnpp
Owner: Malihe Asemani <ml.asemani@gmail.com>
Severity: wishlist

* Package name    : fieldbioinformatics
  Version         : 1.1.3
  Upstream Author : Will Rowe <w.rowe@bham.ac.uk>
* URL             : https://github.com/artic-network/fieldbioinformatics
* License         : MIT
  Programming Lang: Python
  Description     : pipeline for working with virus sequencing data sequenced with nanopore
 This is the ARTIC bioinformatics pipeline for working with virus sequencing
 data, sequenced with nanopore. Nanopore is a complete bioinformatics
 protocol to take the output from the sequencing protocol to consensus
 genome sequences. Includes basecalling, de-multiplexing, mapping, polishing
 and consensus generation.

Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/fieldbioinformatics