element-desktop as installed via the Debian package does not start with firejail.
~ $ firejail /opt/Element/element-desktop --no-sandbox
Reading profile /etc/firejail/element-desktop.profile
Reading profile /etc/firejail/riot-desktop.profile
Reading profile /etc/firejail/riot-web.profile
Reading profile /etc/firejail/whitelist-common.inc
Reading profile /etc/firejail/whitelist-common.local
Reading profile /etc/firejail/electron.profile
Reading profile /etc/firejail/disable-common.inc
Reading profile /etc/firejail/disable-passwdmgr.inc
Reading profile /etc/firejail/disable-programs.inc
Warning: networking feature is disabled in Firejail configuration file
Parent pid 16628, child pid 16629
Private /opt installed in 545.76 ms
Warning: An abstract unix socket for session D-BUS might still be available. Use --net or remove unix from --protocol set.
Post-exec seccomp protector enabled
Seccomp list in: !chroot, check list: @default-keep, prelist: unknown,
Child process initialized in 591.56 ms
/home/hans/.config/Element exists: no
/home/hans/.config/Riot exists: yes
Using legacy user data path: /home/hans/.config/Riot
(node:8) [DEP0005] DeprecationWarning: Buffer() is deprecated due to security and usability issues. Please use the Buffer.alloc(), Buffer.allocUnsafe(), or Buffer.from() methods instead.
(element-desktop:8): dconf-WARNING **: 09:51:34.251: Unable to open /var/lib/flatpak/exports/share/dconf/profile/user: Permission denied
Starting auto update with base URL: https://packages.riot.im/desktop/update/
Auto update not supported on this platform
[50:0814/095134.384213:FATAL:platform_shared_memory_region_posix.cc(254)] This is frequently caused by incorrect permissions on /dev/shm. Try 'sudo chmod 1777 /dev/shm' to fix.
^C
Parent received signal 2, shutting down the child process...
Child received signal 2, shutting down the sandbox...
Parent is shutting down, bye...
~ $ ls -ld /var/lib/flatpak/exports/share/dconf/profile/user
ls: cannot access '/var/lib/flatpak/exports/share/dconf/profile/user': No such file or directory
~ $ ls -ld /var/lib/flatpak/exports/share/dconf/profile/
ls: cannot access '/var/lib/flatpak/exports/share/dconf/profile/': No such file or directory
~ $ ls -ld /var/lib/flatpak/exports/share/dconf/
ls: cannot access '/var/lib/flatpak/exports/share/dconf/': No such file or directory
~ $ ls -ld /var/lib/flatpak/exports/share/
drwxr-xr-x 4 root root 4096 Apr 12 2019 /var/lib/flatpak/exports/share/